人类环状RNA鉴定及其在肿瘤中的潜在功能和意义 黄胜林
视频来源:第二届环状RNA研究论坛精华视频(circRNA)
黄胜林
博士,青年研究员,博士生导师
博士,青年研究员,博士生导师
介绍来自:复旦大学生物医学研究院
工作经历
青年研究员,复旦大学,生物医学研究院(2013.9-今)
助理研究员,上海市肿瘤研究所, 癌基因及相关基因国家重点实验室(2009.7-2013.8)
博士后,美国斯坦福大学(2011.6-20013.7)
助理研究员,上海市肿瘤研究所, 癌基因及相关基因国家重点实验室(2009.7-2013.8)
博士后,美国斯坦福大学(2011.6-20013.7)
教育经历
博士,上海交通大学医学院,肿瘤学(2006-2009)
硕士,上海交通大学医学院,生物化学与分子生物学(2003-2006)
学士,福建医科大学,临床医学(1998-2003)
硕士,上海交通大学医学院,生物化学与分子生物学(2003-2006)
学士,福建医科大学,临床医学(1998-2003)
所获人才项目
浦江人才计划,上海市科委,2014
上海市启明星,上海市科委,2011
上海市卫生计生系统优秀青年人才,上海市卫生系统,2011
上海市启明星,上海市科委,2011
上海市卫生计生系统优秀青年人才,上海市卫生系统,2011
研究方向
课题组运用RNA高通量测序和生物信息分析,并结合各种实验手段,围绕肿瘤转录组开展了非编码RNA与肿瘤特异转录本的鉴定及其病理生理效应研究。解析了环状RNA在肿瘤中的存在情况和表达特征,首次发现环状RNA选择性富集于外泌体,可作为潜在的肿瘤血液标记物;发现肿瘤组织中存在着丰富的特异转录本,并具有重要的临床意义和转化价值。迄今发表SCI论文30余篇,他引率1600多次,主要研究成果发表于Nature Cell Biology, Cell Research, Nature Communications, Hepatology等专业杂志上。主持国家自然基金项目3项,申请发明专利1项,作为主要完成人获教育部自然科学奖二等奖及上海医学科技奖二等奖。
代表论文
- Dongbin Lyu, Shenglin Huang#. The emerging role and implication of human exonic circular RNA. RNA Biology. 2016. DOI: 10.1080/15476286.2016.1227904. (Invited Review)
- Qiupeng Zheng*, Chunyang Bao*, Weijie Guo, Shuyi Li, Jie Chen, Bin Chen, Yanting Luo, Dongbin Lyu, Yan Li, Guohai Shi, Linhui Liang, Jianren Gu, Xianghuo He#, Shenglin Huang#. Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs. Nature Communications. 2016;7:11215. DOI: 10.1038/ncomms11215.
- Chunyang Bao, Dongbin Lyu, Shenglin Huang#. Circular RNA expands its territory. Molecular & Cellular Oncology. 2015;3(2):e1084443.(Invited Commentary)
- Yan Li*, Qiupeng Zheng*, Chunyang Bao, Shuyi Li, Weijie Guo, Jiang Zhao, Di Chen, Jianren Gu, Xianghuo He#, Shenglin Huang#. Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis. Cell Research. 2015;25(8):981-4.
- Chunyang Bao*, Yan Li*, Lin Huan, Yuannv Zhang, Fangyu Zhao, Qifeng Wang, Linhui Liang, Jie Ding, Li Liu, Taoyang Chen, Jinjun Li, Ming Yao, Shenglin Huang#, Xianghuo He#. NF-kB signaling relieves negative regulation by miR-194 in hepatocellular carcinoma by suppressing the transcription factor HNF-1a. Science Signaling. 2015;8(387):ra75.
- Zheng Q, Cai X, Tan MH, Schaffert S, Arnold CP, Gong X, Chen CZ#, Huang S#. Precise gene deletion and replacement using the CRISPR/Cas9 system in human cells. Biotechniques. 2014;57(3):115-24.
- Ding J*, Huang S*, Wang Y, Tian Q, Zha R, Shi H, Wang Q, Ge C, Chen T, Zhao Y, Liang L, Li J, He X. Genome-wide screening revealed that miR-195 targets the TNF-α/NF-κB pathway by downregulating IKKα and TAB3 in hepatocellular carcinoma. Hepatology, 2013; 58(2):654-66.
- Lin J, Huang S*, Wu S, Ding J, Zhao Y, Liang L, Tian Q, Zha R, Zhan R, He X. MicroRNA-423 promotes cell growth and regulates G(1)/S transition by targeting p21Cip1/Waf1 in hepatocellular carcinoma. Carcinogenesis. 2011; 32 (11): 1641-7.
- Huang S, He X. The role of microRNAs in liver cancer progression. Br J Cancer. 2011;104(2):235-40.
- Huang Z, Huang S, Wang Q, Liang L, Ni S, Wang L, Sheng W, He X, Du X. MicroRNA-95 Promotes Cell Proliferation and Targets Sorting Nexin 1 in Human Colorectal Carcinoma. Cancer Res. 2011; 71 (7): 2582-9.
- Huang S, Wu S, Ding J, Lin J, Wei L, Gu J, He X. MicroRNA-181a modulates gene expression of zinc finger family members by directly targeting their coding regions. Nucleic Acids Research. 2010; 38(20):7187-98.
- Ding J*, Huang S*, Wu S, Zhao Y, Liang L, Yan M, Ge C, Yao J, Chen T, Wan D, Wang H, Gu J, Yao M, Li J, Tu H, He X. Gain of miR-151 on chromosome 8q24.3 facilitates tumour cell migration and spreading through downregulating RhoGDIA. Nature Cell Biology. 2010;12(4):390-9.
- Huang S, He X. MicroRNAs: Tiny RNA Molecules, Huge Driving Forces to Move the Cell. Protein & Cell. 2010, 1 (10): 916-926.
- Wu S*, Huang S*, Ding J, Zhao Y, Liang L, Liu T, Zhan R, He X. Multiple MicroRNAs Modulate p21Cip1/Waf1 Expression by Directly Targeting Its 3′ Untranslated Region. Oncogene. 2010;29(15):2302-8.
- Huang S, He X, Ding J, Liang L, Zhao Y, Zhang Z, Yao X, Pan Z, Zhang P, Li J, Wan D, Gu J. Upregulation of miR-23a~27a~24 Decreases Transforming Growth Factor-beta-induced Tumor Suppressive Activities in Human Hepatocellular Carcinoma Cells. International Journal of Cancer, 2008; 123 (4): 972-8.
- Shengli Li, Yuchen Li, Bing Chen, Jingjing Zhao, Shulin Yu, Yan Tang, Qiupeng Zheng, Yan Li, Peng Wang, Xianghuo He, Shenglin Huang. exoRBase: a database of circRNA, lncRNA and mRNA in human blood exosomes. Nucleic Acids Research. 2017 Oct 9.. gkx891,
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